PhD · Quantitative Biomedical Sciences · Dartmouth

Amartya
Bhattacharya

I build generative and foundational models for medical AI, and study how neurosymbolic and Bayesian structure can make machine reasoning more faithful. Currently a doctoral researcher at the Geisel School of Medicine, Dartmouth College.

Location  Hanover, New Hampshire Lab  Medical AI / Generative Imaging Since  2025

01About

I'm a PhD student in Quantitative Biomedical Sciences at the Geisel School of Medicine, Dartmouth College. My work sits at the meeting point of generative modeling, medical imaging, and structured machine reasoning — using deep generative models to make better clinical predictions, and probabilistic and symbolic structure to make those models more trustworthy.

For my dissertation I work with Indrani Bhattacharya on generative image models and foundational models for medical AI — including synthesizing PET imagery from CT to improve cancer-lesion segmentation. Across my doctoral rotations I built a CT organ-segmentation and metastasis-classification framework with Saeed Hassanpour, and developed PRISM-BN with Soroush Vosoughi, a collaboration I continue today.

Before Dartmouth I worked across industry and academic research — an AI founding team in Bangalore, the Indian Institute of Science, Osaka University, and Arizona State University's Banerjee Lab with the Mayo Clinic. My background runs from vision-language models and NLP to statistical methods for longitudinal clinical data. More on Google Scholar.


02Research threads
/ 01

Generative medical imaging

Deep generative models — pix2pix and beyond — for cross-modality synthesis (CT → PET) and downstream lesion segmentation. The dissertation core: generative and foundational models built for clinical imaging tasks.

Dissertation · with Indrani Bhattacharya
/ 02

Neurosymbolic & Bayesian reasoning

Eliciting parameterized Bayesian networks from text, and probing how symbolic structure changes the reasoning of vision-language and language models. Where statistical structure meets learned representation.

/ 03

Clinical image classification

Organ segmentation with TotalSegmentator feeding CT classification by metastasis origin and diagnosis category — comparing segmented vs. full-volume input and single- vs. multi-task heads, with interpretability throughout.

/ 04

Idiographic statistical methods

Hierarchical random-effects extensions of time-lag models for intensive longitudinal clinical data — recovering person-specific dynamics that group-level methods average away.

DTVEM-RE · extending Jacobson et al.

03Selected work
01

PRISM-BN In submission

A corpus of 5,054 paired (text, parameterized Bayesian network) examples, built through a marginal-first CPD elicitation pipeline that extracts nodes, states, edges, and conditional distributions across multiple domains. Benchmarks six LLMs against a fixed judge; a central finding is that structural and CPD-level fidelity are decoupled.

Bayesian networksLLMsbenchmarkNLP
NeurIPS 2026Datasets & Benchmarks
02

Generative PET from CT

An image-translation pipeline synthesizing PET imagery from CT to strengthen cancer-lesion segmentation, operating on preprocessed volumetric arrays rather than rendered images. Achieved SSIM 0.88 and FID 0.0145, with synthetic PET now being integrated into the segmentation workflow.

pix2piximage synthesissegmentationPyTorch
DissertationIn progress
03

Bone-metastasis CT classification

A dual-head ResNet framework classifying CT scans by the origin of skeletal metastases and diagnosis category, comparing segmented vs. full-volume input and single- vs. multi-task learning, with Grad-CAM interpretability and NIfTI export.

ResNetmulti-taskGrad-CAMradiology
Academic RadiologySubmitted
04

YUKINO-SG

Scene-graph–augmented compositional reasoning for vision-language models, evaluated on Winoground. The work reframes a counter-intuitive result — that a strong base VLM can outperform scene-graph-injected variants — as a capability–augmentation tradeoff.

VLMsscene graphscompositionalityWinoground
EMNLP 2026In preparation
05

DTVEM-RE code ↗

A hierarchical random-effects extension of the Differential Time-Varying Effect Model, giving each person their own lag structure via a Bayesian state-space VAR (Stan) and a continuous-time Ornstein–Uhlenbeck model (ctsem). Directly implements the random-effects extension named as future work by the original DTVEM authors.

hierarchical BayesStanstate-spaceEMA
MethodsWorking paper

04Publications
2025

Can Out-of-Domain Data Help to Learn Domain-Specific Prompts for Multimodal Misinformation Detection?

A. Bhattacharya, D. Brahma, S. Nagaje, A. Asati, V. Verma, S. Biswas

Proceedings of WACV 2025 · pp. 2808–2817  peer-reviewed

2023

Automated Detection of Students' Gaze Interactions in Collaborative Learning Videos: A Novel Approach

Q. Zhou, A. Bhattacharya, W. Suraworachet, H. Nagahara, M. Cukurova

European Conference on Technology Enhanced Learning (ECTEL) · Springer · pp. 504–517  best-paper nominee

2023

A Fully Unsupervised Instance Segmentation Technique for White Blood Cell Images

S. Biswas, A. Bhattacharya

arXiv:2306.14875

2022

Multi-modal Fusion Model for Predicting Adverse Cardiovascular Outcome Post Percutaneous Coronary Intervention

A. Bhattacharya, et al.

Physiological Measurement · 43(12): 124004 · IF 3.2  with Mayo Clinic


05Experience & education
Sep 2025 — PresentHanover, NH · USA

Dartmouth College

Graduate Research Assistant · Geisel School of Medicine

  • Generative models translating CT to PET for improved cancer-lesion segmentation
  • Volumetric pipeline operating on preprocessed arrays (SSIM 0.88, FID 0.0145)
Jun 2025 — PresentPhD Programme

PhD, Quantitative Biomedical Sciences

Geisel School of Medicine, Dartmouth College

  • Rotations across generative imaging, clinical classification, and neurosymbolic NLP
2024 — 2025Bangalore, India

Big Brain Intelligence Inc.

Research Scientist · AI founding team

  • LLM/VLM extraction pipelines (Llama 3.2, Qwen2-VL, Qwen2.5) — ~1M components onboarded
  • Built an LLM-verification pipeline rating outputs for context, relevance, and accuracy
2023 — 2024Bangalore, India

Indian Institute of Science (IISc)

Research Fellow · with Prof. Soma Biswas

  • Multimodal misinformation detection with DRDO; domain-specific prompting (WACV 2025)
2022 — 2023Osaka, Japan

Osaka University

Visiting Researcher · with Prof. Hajime Nagahara

  • Spatio-temporal framework for head and gaze-object tracking (ECTEL best-paper nominee)
2021 — 2022Tempe, AZ · USA

Arizona State University — Banerjee Lab

Research Intern · with the Mayo Clinic

  • Multimodal model for cardiovascular-outcome prediction from ECG and EHR data
2018 — 2022Kolkata, India

University of Calcutta

B.Tech, Computer Science & Engineering · GPA 3.55/4.00

  • First Class with Distinction · top 1% of the department

Let's talk —
research, collaboration,
or otherwise.

amartya.bhattacharya1729@gmail.com